MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Citrobacter koseri
19428wH4_BL23
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 33
bases: 4,826,282 bps
CDS: 4,459
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 81
misc RNA:
Total features: 4,551
Total number of protein coding genes annotated/found:
4,459
Display
20
50
100
All items per page
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 223 pages
Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5017|JADGKP010000001.1
SEQF5017_00029
Genome Viewer
NA
AA
354/118
1702-2055
putative protein YbaA
SEQF5017|JADGKP010000001.1
SEQF5017_00030
Genome Viewer
NA
AA
1551/517
3645-2095
putative cyclic di-GMP phosphodiesterase PdeB
SEQF5017|JADGKP010000001.1
SEQF5017_00031
Genome Viewer
NA
AA
261/87
3871-4131
50S ribosomal protein L31 type B
SEQF5017|JADGKP010000001.1
SEQF5017_00032
Genome Viewer
NA
AA
141/47
4133-4273
50S ribosomal protein L36 2
SEQF5017|JADGKP010000001.1
SEQF5017_00033
Genome Viewer
NA
AA
471/157
4821-4351
Inner membrane protein YlaC
SEQF5017|JADGKP010000001.1
SEQF5017_00034
Genome Viewer
NA
AA
552/184
5486-4935
Maltose O-acetyltransferase
SEQF5017|JADGKP010000001.1
SEQF5017_00035
Genome Viewer
NA
AA
219/73
5888-5670
Hemolysin expression-modulating protein Hha
SEQF5017|JADGKP010000001.1
SEQF5017_00036
Genome Viewer
NA
AA
375/125
6290-5916
Hha toxicity modulator TomB
SEQF5017|JADGKP010000001.1
SEQF5017_00037
Genome Viewer
NA
AA
3147/1049
9938-6792
Multidrug efflux pump subunit AcrB
SEQF5017|JADGKP010000001.1
SEQF5017_00038
Genome Viewer
NA
AA
1194/398
11154-9961
Multidrug efflux pump subunit AcrA
SEQF5017|JADGKP010000001.1
SEQF5017_00039
Genome Viewer
NA
AA
654/218
11296-11949
HTH-type transcriptional regulator AcrR
SEQF5017|JADGKP010000001.1
SEQF5017_00040
Genome Viewer
NA
AA
3357/1119
12075-15431
Mechanosensitive channel MscK
SEQF5017|JADGKP010000001.1
SEQF5017_00041
Genome Viewer
NA
AA
948/316
16415-15468
ISNCY family transposase ISRor2
SEQF5017|JADGKP010000001.1
SEQF5017_00042
Genome Viewer
NA
AA
168/56
16652-16485
hypothetical protein
SEQF5017|JADGKP010000001.1
SEQF5017_00043
Genome Viewer
NA
AA
528/176
17194-16667
Primosomal replication protein N''
SEQF5017|JADGKP010000001.1
SEQF5017_00044
Genome Viewer
NA
AA
396/132
17246-17641
Inner membrane protein YbaN
SEQF5017|JADGKP010000001.1
SEQF5017_00045
Genome Viewer
NA
AA
552/184
17792-18343
Adenine phosphoribosyltransferase
SEQF5017|JADGKP010000001.1
SEQF5017_00046
Genome Viewer
NA
AA
1926/642
18533-20458
DNA polymerase III subunit tau
SEQF5017|JADGKP010000001.1
SEQF5017_00047
Genome Viewer
NA
AA
330/110
20504-20833
Nucleoid-associated protein YbaB
SEQF5017|JADGKP010000001.1
SEQF5017_00048
Genome Viewer
NA
AA
606/202
20833-21438
Recombination protein RecR
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 223 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
